An inverse method for obtaining the attenuation profile and small variations in the sound speed and density profiles of the ocean bottom

Submitted in partial fulfillment of the requirements for the degree of Doctor of Philosophy at the Massachusetts Institute of Technology and the Woods Hole Oceanographic Institution May 1985The acoustic properties of marine sediments have a direct effect on the propagation of sound in the ocean. In the frequency range of interest (50 - 500 Hz) the sediment can be modelled as a fluid. Assuming horizontal stratification of the ocean bottom, the acoustic parameters of interest are the compressional wave speed, the compressional wave attenuation and density as a function of depth. An inverse method based on a perturbation technique is presented in this thesis for the determination of these parameters. A monochromatic source experiment is proposed because of the desirability of such an experiment for determining the acoustic properties of an anelastic medium. The input information is the plane wave reflection coerricent as a function of the angle of incidence at a fixed frequency. A nonlinear integral equation relating the variations of these acoustic properties from a known reference value to the plane wave reflection coefficient is derived. This is then linearised using the Born approximation. The region of validity of the Born approximation is derived and based on this the optimum angular aperture for the input data is obtained. The linearised integral equation is a Fredholm integral equation of the first kind. An acceptable stable solution of the integral equation is obtained by imposing a priori constraints on the solution. The inversion method is tested using synthetic data and inversions are carried out for various examples of the attenuation coefficient profile and the sound speed profile. The results obtained with noise free data show good agreement between the true profiles and the reconstructed profiles. The resolution obtainable with the data set is studied using the resolving power theory of Backus and Gilbert and the inversion method is shown to provide adequate resolution. The effect of additive noise in data is examined and inversions performed with noisy data yielded stable acceptable results.I acknowledge the financial support provided by the education office in the Woods Hole Oceanographic Institution and the Office of Naval Research

Estimation of three-dimensional water column sound speed profiles and sediment compressional wave speed and density profiles using a distributed network of buoys

Author Posting. © Acoustical Society of America, 2020. This article is posted here by permission of Acoustical Society of America for personal use, not for redistribution. The definitive version was published in Journal of the Acoustical Society of America 147(3), (2020): 1392-1403, doi:10.1121/10.0000794.Broadband data acquired during the Modal Mapping Experiment (MOMAX) V experiment are used to invert simultaneously for the three-dimensional (3D) water column sound speed profiles and the compressional wave speed and density profiles of the seabed in shallow waters off the coast of New Jersey. Linear Frequency Modulation sweep signals in the band 50–300 Hz are transmitted from a nearly stationary source at several discrete positions to a set of freely drifting receivers. Mode travel times are estimated from the signals acquired by the drifting buoys, and these are then used as input data in an inversion algorithm that estimates the acoustic properties of the water column and sediments. The resulting 3D compressional wave speed profiles in the seabed are generally consistent with the one-dimensional profile obtained during the narrowband component of MOMAX V, as well as the results from other experiments in the same area. The validity of the inversion results has also been assessed by the ability of the inverted model to predict the fields measured during the narrowband experiments.The authors gratefully recognize the support of the entire team that was responsible for the execution of MOMAX V. The work reported in this paper was done with the support of the Office of Naval Research under Grant Nos. N00014-09-1-0505 and N00014-12-1-0083 and the Space and Naval Warfare Systems Command through Naval Sea Systems Command Contract No. N00024-02-D-6604.2020-09-0

Microstructure-guided numerical simulations to predict the thermal performance of a hierarchical cement-based composite material

This paper presents a microstructure-guided numerical homogenization technique to predict the effective thermal conductivity of a hierarchical cement-based material containing phase change material (PCM)-impregnated lightweight aggregates (LWA). Porous inclusions such as LWAs embedded in a cementitious matrix are filled with multiple fluid phases including PCM to obtain desirable thermal properties for building and infrastructure applications. Simulations are carried out on realistic three-dimensional microstructures generated using pore structure information. An inverse analysis procedure is used to extract the intrinsic thermal properties of those microstructural components for which data is not available. The homogenized heat flux is predicted for an imposed temperature gradient from which the effective composite thermal conductivity is computed. The simulated effective composite thermal conductivities are found to correlate very well with experimental measurements for a family of LWA-PCM composites considered in the paper. Comparisons with commonly used analytical homogenization models show that the microstructure-guided simulation approach provides superior results for composites exhibiting large property contrast between phases. By linking the microstructure and thermal properties of hierarchical materials, an efficient framework is available for optimizing the material design to improve thermal efficiency of a wide variety of heterogeneous materials

Parallel-Sparse Symmetrical/Unsymmetrical Finite Element Domain Decomposition Solver with Multi-Point Constraints for Structural/Acoustic Analysis

Details of parallel-sparse Domain Decomposition (DD) with multi-point constraints (MPC) formulation are explained. Major computational components of the DD formulation are identified. Critical roles of parallel (direct) sparse and iterative solvers with MPC are discussed within the framework of DD formulation. Both symmetrical and unsymmetrical system of simultaneous linear equations (SLE) can be handled by the developed DD formulation. For symmetrical SLE, option for imposing MPC equations is also provided. Large-scale (up to 25 million unknowns involving complex numbers) structural and acoustic Finite Element (FE) analysis are used to evaluate the parallel computational performance of the proposed DD implementation using different parallel computer platforms. Numerical examples show that the authors\u27 MPI/FORTRAN code is significantly faster than the commercial parallel sparse solver. Furthermore, the developed software can also conveniently and efficiently solve large SLE with MPCs, a feature not available in almost all commercial parallel sparse solvers

Simulating the Fracture of Notched Mortar Beams through Extended Finite Element Method (XFEM) and Peridynamics

This paper simulates fracture in notched mortar beams under three-point bending using extended finite element method (XFEM) and peridynamics. A three-phase microstructure (i.e., cement paste, aggregates, and paste-aggregate interface) is used for constitutive modeling of the mortar to obtain the elastic properties for simulation. In the XFEM approach, the simulated homogenized elastic modulus is used along with the total fracture energy of the cement mortar in a damage model to predict the fracture response of the mortar including crack propagation and its fracture parameters (Mode I stress intensity factor, KIC and critical crack tip opening displacement, CTODC). The damage model incorporates a maximum principal stress-based damage initiation criteria and a traction-separation law for damage evolution. In the peridynamics approach, a bond-based model involving a prototype microelastic brittle (PMB) material model is used. The elastic properties and fracture energy release rates are used as inputs in the PMB model, along with the choice of peridynamic horizon size. Comparison with experimental fracture properties (KIC, CTODC) as well as crack propagation paths from digital image correlation show that both the approaches yield satisfactory results, particularly for KIC and crack extension. Thus, both these methods can be adopted for fracture simulation of cement-based materials

Verification and Validation of a Three-Dimensional Generalized Composite Material Model

A general purpose orthotropic elasto-plastic computational constitutive material model has been developed to improve predictions of the response of composites subjected to high velocity impact. The three-dimensional orthotropic elasto-plastic composite material model is being implemented initially for solid elements in LS-DYNA as MAT213. In order to accurately represent the response of a composite, experimental stress-strain curves are utilized as input, allowing for a more general material model that can be used on a variety of composite applications. The theoretical details are discussed in a companion paper. This paper documents the implementation, verification and qualitative validation of the material model using the T800- F3900 fiber/resin composite material

Verification and Validation of a Three-Dimensional Generalized Composite Material Model

A general purpose orthotropic elasto-plastic computational constitutive material model has been developed to improve predictions of the response of composites subjected to high velocity impact. The three-dimensional orthotropic elasto-plastic composite material model is being implemented initially for solid elements in LS-DYNA as MAT213. In order to accurately represent the response of a composite, experimental stress-strain curves are utilized as input, allowing for a more general material model that can be used on a variety of composite applications. The theoretical details are discussed in a companion paper. This paper documents the implementation, verification and qualitative validation of the material model using the T800-F3900 fiber/resin composite materia

The impact of viral mutations on recognition by SARS-CoV-2 specific T cells.

We identify amino acid variants within dominant SARS-CoV-2 T cell epitopes by interrogating global sequence data. Several variants within nucleocapsid and ORF3a epitopes have arisen independently in multiple lineages and result in loss of recognition by epitope-specific T cells assessed by IFN-γ and cytotoxic killing assays. Complete loss of T cell responsiveness was seen due to Q213K in the A∗01:01-restricted CD8+ ORF3a epitope FTSDYYQLY207-215; due to P13L, P13S, and P13T in the B∗27:05-restricted CD8+ nucleocapsid epitope QRNAPRITF9-17; and due to T362I and P365S in the A∗03:01/A∗11:01-restricted CD8+ nucleocapsid epitope KTFPPTEPK361-369. CD8+ T cell lines unable to recognize variant epitopes have diverse T cell receptor repertoires. These data demonstrate the potential for T cell evasion and highlight the need for ongoing surveillance for variants capable of escaping T cell as well as humoral immunity.This work is supported by the UK Medical Research Council (MRC); Chinese Academy of Medical Sciences(CAMS) Innovation Fund for Medical Sciences (CIFMS), China; National Institute for Health Research (NIHR)Oxford Biomedical Research Centre, and UK Researchand Innovation (UKRI)/NIHR through the UK Coro-navirus Immunology Consortium (UK-CIC). Sequencing of SARS-CoV-2 samples and collation of data wasundertaken by the COG-UK CONSORTIUM. COG-UK is supported by funding from the Medical ResearchCouncil (MRC) part of UK Research & Innovation (UKRI),the National Institute of Health Research (NIHR),and Genome Research Limited, operating as the Wellcome Sanger Institute. T.I.d.S. is supported by a Well-come Trust Intermediate Clinical Fellowship (110058/Z/15/Z). L.T. is supported by the Wellcome Trust(grant number 205228/Z/16/Z) and by theUniversity of Liverpool Centre for Excellence in Infectious DiseaseResearch (CEIDR). S.D. is funded by an NIHR GlobalResearch Professorship (NIHR300791). L.T. and S.C.M.are also supported by the U.S. Food and Drug Administration Medical Countermeasures Initiative contract75F40120C00085 and the National Institute for Health Research Health Protection Research Unit (HPRU) inEmerging and Zoonotic Infections (NIHR200907) at University of Liverpool inpartnership with Public HealthEngland (PHE), in collaboration with Liverpool School of Tropical Medicine and the University of Oxford.L.T. is based at the University of Liverpool. M.D.P. is funded by the NIHR Sheffield Biomedical ResearchCentre (BRC – IS-BRC-1215-20017). ISARIC4C is supported by the MRC (grant no MC_PC_19059). J.C.K.is a Wellcome Investigator (WT204969/Z/16/Z) and supported by NIHR Oxford Biomedical Research Centreand CIFMS. The views expressed are those of the authors and not necessarily those of the NIHR or MRC

The impact of surgical delay on resectability of colorectal cancer: An international prospective cohort study

AIM: The SARS-CoV-2 pandemic has provided a unique opportunity to explore the impact of surgical delays on cancer resectability. This study aimed to compare resectability for colorectal cancer patients undergoing delayed versus non-delayed surgery. METHODS: This was an international prospective cohort study of consecutive colorectal cancer patients with a decision for curative surgery (January-April 2020). Surgical delay was defined as an operation taking place more than 4 weeks after treatment decision, in a patient who did not receive neoadjuvant therapy. A subgroup analysis explored the effects of delay in elective patients only. The impact of longer delays was explored in a sensitivity analysis. The primary outcome was complete resection, defined as curative resection with an R0 margin. RESULTS: Overall, 5453 patients from 304 hospitals in 47 countries were included, of whom 6.6% (358/5453) did not receive their planned operation. Of the 4304 operated patients without neoadjuvant therapy, 40.5% (1744/4304) were delayed beyond 4 weeks. Delayed patients were more likely to be older, men, more comorbid, have higher body mass index and have rectal cancer and early stage disease. Delayed patients had higher unadjusted rates of complete resection (93.7% vs. 91.9%, P = 0.032) and lower rates of emergency surgery (4.5% vs. 22.5%, P < 0.001). After adjustment, delay was not associated with a lower rate of complete resection (OR 1.18, 95% CI 0.90-1.55, P = 0.224), which was consistent in elective patients only (OR 0.94, 95% CI 0.69-1.27, P = 0.672). Longer delays were not associated with poorer outcomes. CONCLUSION: One in 15 colorectal cancer patients did not receive their planned operation during the first wave of COVID-19. Surgical delay did not appear to compromise resectability, raising the hypothesis that any reduction in long-term survival attributable to delays is likely to be due to micro-metastatic disease

Reducing the environmental impact of surgery on a global scale: systematic review and co-prioritization with healthcare workers in 132 countries

Background Healthcare cannot achieve net-zero carbon without addressing operating theatres. The aim of this study was to prioritize feasible interventions to reduce the environmental impact of operating theatres. Methods This study adopted a four-phase Delphi consensus co-prioritization methodology. In phase 1, a systematic review of published interventions and global consultation of perioperative healthcare professionals were used to longlist interventions. In phase 2, iterative thematic analysis consolidated comparable interventions into a shortlist. In phase 3, the shortlist was co-prioritized based on patient and clinician views on acceptability, feasibility, and safety. In phase 4, ranked lists of interventions were presented by their relevance to high-income countries and low–middle-income countries. Results In phase 1, 43 interventions were identified, which had low uptake in practice according to 3042 professionals globally. In phase 2, a shortlist of 15 intervention domains was generated. In phase 3, interventions were deemed acceptable for more than 90 per cent of patients except for reducing general anaesthesia (84 per cent) and re-sterilization of ‘single-use’ consumables (86 per cent). In phase 4, the top three shortlisted interventions for high-income countries were: introducing recycling; reducing use of anaesthetic gases; and appropriate clinical waste processing. In phase 4, the top three shortlisted interventions for low–middle-income countries were: introducing reusable surgical devices; reducing use of consumables; and reducing the use of general anaesthesia. Conclusion This is a step toward environmentally sustainable operating environments with actionable interventions applicable to both high– and low–middle–income countries